Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | EJI01_12770 | Not Available | Negative | 2622086 - 2624188 | 77685.6 |
| phospholipase d family protein | EJI01_12775 | Not Available | Positive | 2624313 - 2625896 | 58775.8 |
| asnc family transcriptional regulator | EJI01_12780 | Not Available | Negative | 2625930 - 2626439 | 18384.7 |
| 1-aminocyclopropane-1-carboxylate deaminase | EJI01_12785 | Not Available | Positive | 2626569 - 2627585 | 36476.7 |
| hypothetical protein | EJI01_12790 | Not Available | Positive | 2627771 - 2628094 | 11265.6 |
| enoyl-coa hydratase/isomerase family protein | EJI01_12795 | Not Available | Negative | 2628240 - 2628974 | 26816.2 |
| coa transferase | EJI01_12800 | Not Available | Negative | 2628971 - 2630194 | 43369.2 |
| choline-sulfatase | EJI01_12805 | Not Available | Positive | 2630277 - 2631800 | 57722.2 |
| aldehyde dehydrogenase family protein | EJI01_12810 | Not Available | Positive | 2631814 - 2633313 | 52976.0 |
| 3-hydroxyisobutyrate dehydrogenase | EJI01_12815 | Not Available | Positive | 2633346 - 2634239 | 30302.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
