Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_12670 | Not Available | Positive | 2601300 - 2601518 | 7318.91 |
| diaminopimelate decarboxylase | EJI01_12675 | Not Available | Positive | 2601515 - 2602795 | 45599.5 |
| sulfoxide reductase heme-binding subunit yedz | EJI01_12680 | Not Available | Negative | 2602796 - 2603446 | 24457.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EJI01_12685 | Not Available | Negative | 2603458 - 2604456 | 37090.5 |
| c-type cytochrome biogenesis protein ccsb | EJI01_12690 | Not Available | Negative | 2604546 - 2605862 | 49086.3 |
| cytochrome c biogenesis protein resb | EJI01_12695 | Not Available | Negative | 2605859 - 2607997 | 77539.7 |
| cytochrome c4 | EJI01_12700 | Not Available | Negative | 2608103 - 2608777 | 23578.0 |
| yiha family ribosome biogenesis gtp-binding protein | EJI01_12705 | Not Available | Positive | 2608848 - 2609588 | 27047.6 |
| alpha/beta hydrolase | EJI01_12710 | Not Available | Positive | 2609585 - 2610496 | 33700.1 |
| lipid a biosynthesis acyltransferase | EJI01_12715 | Not Available | Negative | 2610490 - 2611374 | 33183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
