Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | EJI01_12620 | Not Available | Negative | 2590386 - 2591516 | 42440.0 |
| 3-dehydroquinate synthase | EJI01_12625 | Not Available | Negative | 2591533 - 2592633 | 38979.4 |
| shikimate kinase | EJI01_12630 | Not Available | Negative | 2592670 - 2593215 | 20069.1 |
| type iv pilus secretin pilq | EJI01_12635 | Not Available | Negative | 2593240 - 2595390 | 76368.3 |
| pilus assembly protein pilp | EJI01_12640 | Not Available | Negative | 2595387 - 2595926 | 19993.2 |
| pilus assembly protein pilo | EJI01_12645 | Not Available | Negative | 2595923 - 2596597 | 24909.8 |
| fimbrial protein | EJI01_12650 | Not Available | Negative | 2596606 - 2597226 | 22719.3 |
| pilus assembly protein pilm | EJI01_12655 | Not Available | Negative | 2597223 - 2598302 | 38837.6 |
| penicillin-binding protein 1a | EJI01_12660 | Not Available | Positive | 2598543 - 2600951 | 87705.1 |
| iron donor protein cyay | EJI01_12665 | Not Available | Negative | 2600955 - 2601287 | 12133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
