Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vacj family lipoprotein | EJI01_12570 | Not Available | Negative | 2577570 - 2578316 | 27167.1 |
| outer membrane lipid asymmetry maintenance protein mlad | EJI01_12575 | Not Available | Negative | 2578313 - 2578801 | 17247.6 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | EJI01_12580 | Not Available | Negative | 2578822 - 2579604 | 27635.3 |
| abc transporter atp-binding protein | EJI01_12585 | Not Available | Negative | 2579601 - 2580422 | 29389.6 |
| glutamate synthase subunit beta | EJI01_12590 | Not Available | Negative | 2580536 - 2582014 | 53808.4 |
| glutamate synthase subunit alpha | EJI01_12595 | Not Available | Negative | 2582049 - 2586794 | 172669.0 |
| transposase | EJI01_12600 | Not Available | Negative | 2586978 - 2587670 | 25937.0 |
| sam-dependent methyltransferase | EJI01_12605 | Not Available | Negative | 2587692 - 2588558 | 32121.0 |
| duf1415 domain-containing protein | EJI01_12610 | Not Available | Negative | 2588555 - 2589130 | 20662.1 |
| mfs transporter | EJI01_12615 | Not Available | Negative | 2589127 - 2590389 | 42362.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
