Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | EJI01_12420 | Not Available | Negative | 2555193 - 2555804 | 23723.9 |
| cytochrome c1 | EJI01_12425 | Not Available | Negative | 2555906 - 2556661 | 28116.8 |
| cytochrome bc complex cytochrome b subunit | EJI01_12430 | Not Available | Negative | 2556678 - 2558078 | 52758.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EJI01_12435 | Not Available | Negative | 2558092 - 2558706 | 21862.2 |
| large conductance mechanosensitive channel protein mscl | EJI01_12440 | Not Available | Positive | 2558864 - 2559292 | 15258.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EJI01_12445 | Not Available | Negative | 2559279 - 2560331 | 35863.7 |
| nif3-like dinuclear metal center hexameric protein | EJI01_12450 | Not Available | Negative | 2560328 - 2561101 | 27334.6 |
| do family serine endopeptidase | EJI01_12455 | Not Available | Positive | 2561288 - 2562451 | 40373.2 |
| twin-arginine translocase subunit tatc | EJI01_12460 | Not Available | Negative | 2562475 - 2563278 | 29606.0 |
| sec-independent protein translocase subunit tatb | EJI01_12465 | Not Available | Negative | 2563339 - 2563797 | 16996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
