Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | EJI01_12320 | Not Available | Negative | 2537460 - 2538512 | 37916.7 |
| 50s ribosomal protein l27 | EJI01_12325 | Not Available | Negative | 2538580 - 2538837 | 8796.66 |
| 50s ribosomal protein l21 | EJI01_12330 | Not Available | Negative | 2538850 - 2539161 | 11212.7 |
| octaprenyl diphosphate synthase | EJI01_12335 | Not Available | Positive | 2539348 - 2540340 | 35098.3 |
| Trna-pro | Not Available | Not Available | Positive | 2540390 - 2540466 | Not Available |
| type iv-a pilus assembly atpase pilb | EJI01_12345 | Not Available | Positive | 2540585 - 2542321 | 62583.5 |
| type ii secretion system f family protein | EJI01_12350 | Not Available | Positive | 2542342 - 2543568 | 44418.8 |
| prepilin peptidase | EJI01_12355 | Not Available | Positive | 2543568 - 2544410 | 29809.9 |
| dephospho-coa kinase | EJI01_12360 | Not Available | Positive | 2544432 - 2545031 | 21267.6 |
| mboat family protein | EJI01_12365 | Not Available | Positive | 2545115 - 2546605 | 55675.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
