Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor n(5)-glutamine methyltransferase | EJI01_12270 | Not Available | Positive | 2528272 - 2529123 | 30011.9 |
| grx4 family monothiol glutaredoxin | EJI01_12275 | Not Available | Positive | 2529153 - 2529479 | 11961.4 |
| cupin domain-containing protein | EJI01_12280 | Not Available | Positive | 2529621 - 2530121 | 18069.1 |
| aaa family atpase | EJI01_12285 | Not Available | Positive | 2530248 - 2531240 | 36477.7 |
| hlyc/corc family transporter | EJI01_12290 | Not Available | Positive | 2531292 - 2532608 | 48445.8 |
| lytic transglycosylase domain-containing protein | EJI01_12295 | Not Available | Negative | 2532600 - 2533244 | 24001.9 |
| proline--trna ligase | EJI01_12300 | Not Available | Negative | 2533241 - 2534986 | 63754.7 |
| rna pyrophosphohydrolase | EJI01_12305 | Not Available | Positive | 2535111 - 2535761 | 25762.4 |
| hypothetical protein | EJI01_12310 | Not Available | Positive | 2535709 - 2536302 | 21799.1 |
| glutamate 5-kinase | EJI01_12315 | Not Available | Negative | 2536307 - 2537458 | 40716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
