Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | EJI01_12220 | Not Available | Negative | 2516462 - 2517691 | 43732.9 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EJI01_12225 | Not Available | Positive | 2517894 - 2519204 | 47508.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | EJI01_12230 | Not Available | Positive | 2519375 - 2520256 | 32562.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | EJI01_12235 | Not Available | Positive | 2520296 - 2521144 | 31301.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | EJI01_12240 | Not Available | Positive | 2521168 - 2522175 | 36908.9 |
| glycerophosphodiester phosphodiesterase | EJI01_12245 | Not Available | Positive | 2522172 - 2523005 | 29653.2 |
| mechanosensitive ion channel family protein | EJI01_12250 | Not Available | Positive | 2523049 - 2525445 | 84702.0 |
| hypothetical protein | EJI01_12255 | Not Available | Negative | 2525459 - 2525737 | 9951.43 |
| glutamyl-trna reductase | EJI01_12260 | Not Available | Positive | 2525820 - 2527091 | 46113.7 |
| peptide chain release factor 1 | EJI01_12265 | Not Available | Positive | 2527184 - 2528272 | 40379.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
