Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | EJI01_12020 | Not Available | Positive | 2482131 - 2482961 | 30993.5 |
| 7-carboxy-7-deazaguanine synthase | EJI01_12025 | Not Available | Positive | 2482968 - 2483606 | 23055.6 |
| 6-carboxytetrahydropterin synthase | EJI01_12030 | Not Available | Positive | 2483627 - 2484004 | 13916.7 |
| quinolinate synthase nada | EJI01_12035 | Not Available | Negative | 2484008 - 2485132 | 39961.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | EJI01_12040 | Not Available | Negative | 2485270 - 2486136 | 30434.5 |
| nad(p)-dependent glycerol-3-phosphate dehydrogenase | EJI01_12045 | Not Available | Negative | 2486140 - 2487141 | 34102.6 |
| protein-export chaperone secb | EJI01_12050 | Not Available | Negative | 2487164 - 2487628 | 16969.3 |
| glutaredoxin 3 | EJI01_12055 | Not Available | Negative | 2487733 - 2487993 | 9416.62 |
| rhodanese-like domain-containing protein | EJI01_12060 | Not Available | Negative | 2488014 - 2488421 | 14273.5 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | EJI01_12065 | Not Available | Positive | 2488494 - 2489237 | 27765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
