Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1697 domain-containing protein | EJI01_11970 | Not Available | Negative | 2472380 - 2472919 | 19264.1 |
| methionine--trna ligase | EJI01_11975 | Not Available | Positive | 2473007 - 2475085 | 76777.8 |
| hypothetical protein | EJI01_11980 | Not Available | Positive | 2475094 - 2475309 | 6666.08 |
| stas domain-containing protein | EJI01_11985 | Not Available | Positive | 2475337 - 2477013 | 59506.2 |
| outer membrane protein assembly factor bame | EJI01_11990 | Not Available | Negative | 2477010 - 2477474 | 17111.1 |
| hypothetical protein | EJI01_11995 | Not Available | Negative | 2477529 - 2478197 | 22687.4 |
| duf3460 family protein | EJI01_12000 | Not Available | Positive | 2478327 - 2478533 | 8067.53 |
| segregation/condensation protein a | EJI01_12005 | Not Available | Positive | 2478645 - 2479442 | 30492.5 |
| l-aspartate oxidase | EJI01_12010 | Not Available | Positive | 2479623 - 2481194 | 56596.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | EJI01_12015 | Not Available | Positive | 2481248 - 2482117 | 30380.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
