Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | EJI01_11820 | Not Available | Negative | 2438577 - 2439032 | 16034.8 |
| jab domain-containing protein | EJI01_11825 | Not Available | Positive | 2439096 - 2439773 | 24297.8 |
| dna mismatch repair protein muts | EJI01_11830 | Not Available | Positive | 2439806 - 2440462 | 24089.2 |
| globin | EJI01_11835 | Not Available | Negative | 2440560 - 2440973 | 15865.0 |
| transporter substrate-binding domain-containing protein | EJI01_11840 | Not Available | Positive | 2441062 - 2441892 | 29697.9 |
| amino acid abc transporter permease | EJI01_11845 | Not Available | Positive | 2441974 - 2442669 | 25253.5 |
| amino acid abc transporter permease | EJI01_11850 | Not Available | Positive | 2442666 - 2443376 | 26135.8 |
| amino acid abc transporter atp-binding protein | EJI01_11855 | Not Available | Positive | 2443373 - 2444116 | 27381.2 |
| isopenicillin n synthase family oxygenase | EJI01_11860 | Not Available | Positive | 2444133 - 2445128 | 36823.2 |
| plp-dependent transferase | EJI01_11865 | Not Available | Negative | 2445362 - 2446549 | 42891.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
