Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | EJI01_11715 | Not Available | Negative | 2421180 - 2422460 | 44799.4 |
| trap transporter small permease | EJI01_11720 | Not Available | Negative | 2422457 - 2423041 | 21173.2 |
| trap transporter substrate-binding protein | EJI01_11725 | Not Available | Negative | 2423079 - 2424104 | 37967.1 |
| amidase | EJI01_11730 | Not Available | Negative | 2424155 - 2425498 | 46217.2 |
| hypothetical protein | EJI01_11735 | Not Available | Negative | 2425527 - 2426282 | 27959.1 |
| lysr family transcriptional regulator | EJI01_11740 | Not Available | Negative | 2426388 - 2427485 | 40259.9 |
| is110 family transposase | EJI01_11745 | Not Available | Positive | 2428029 - 2429063 | 37992.3 |
| class i sam-dependent methyltransferase | EJI01_11755 | Not Available | Negative | 2429574 - 2430197 | 23101.5 |
| cbs domain-containing protein | EJI01_11760 | Not Available | Negative | 2430220 - 2430660 | 16439.2 |
| sdr family oxidoreductase | EJI01_11765 | Not Available | Positive | 2430731 - 2431522 | 27226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
