Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_01130 | Not Available | Positive | 244807 - 245727 | 33827.9 |
| paraquat-inducible protein a | EJI01_01135 | Not Available | Positive | 245724 - 246347 | 22466.3 |
| paraquat-inducible membrane protein a | EJI01_01140 | Not Available | Positive | 246344 - 247024 | 24612.6 |
| mce family protein | EJI01_01145 | Not Available | Positive | 247083 - 248708 | 58848.7 |
| membrane integrity-associated transporter subunit pqic | EJI01_01150 | Not Available | Positive | 248705 - 249331 | 21775.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EJI01_01155 | Not Available | Positive | 249333 - 249875 | 19040.0 |
| degt/dnrj/eryc1/strs family aminotransferase | EJI01_01160 | Not Available | Positive | 250041 - 251234 | 43675.2 |
| glycosyltransferase family 2 protein | EJI01_01165 | Not Available | Positive | 251216 - 252178 | 35944.9 |
| bcr/cfla family efflux mfs transporter | EJI01_01170 | Not Available | Positive | 252314 - 253519 | 41678.3 |
| mfs transporter | EJI01_01175 | Not Available | Positive | 253506 - 254939 | 48989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
