Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_11660 | Not Available | Negative | 2410273 - 2411256 | 36497.6 |
| duf2917 domain-containing protein | EJI01_11665 | Not Available | Positive | 2411396 - 2411716 | 11050.9 |
| bluf domain-containing protein | EJI01_11670 | Not Available | Negative | 2411738 - 2412142 | 15243.3 |
| crp/fnr family transcriptional regulator | EJI01_11675 | Not Available | Positive | 2412233 - 2413003 | 29230.3 |
| hypothetical protein | EJI01_11680 | Not Available | Positive | 2413116 - 2414414 | 47136.0 |
| hypothetical protein | EJI01_11685 | Not Available | Negative | 2414399 - 2415331 | 34476.2 |
| hypothetical protein | EJI01_11690 | Not Available | Negative | 2415396 - 2416265 | 33007.3 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | EJI01_11695 | Not Available | Positive | 2416285 - 2417709 | 49214.8 |
| lrp/asnc family transcriptional regulator | EJI01_11700 | Not Available | Negative | 2417724 - 2418293 | 20916.0 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | EJI01_11705 | Not Available | Positive | 2418420 - 2420300 | 67547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
