Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_11610 | Not Available | Positive | 2399591 - 2399905 | 10841.0 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | EJI01_11615 | Not Available | Negative | 2399987 - 2401372 | 52315.8 |
| glycoside hydrolase family 15 protein | EJI01_11620 | Not Available | Negative | 2401398 - 2403323 | 71373.8 |
| trehalose-phosphatase | EJI01_11625 | Not Available | Negative | 2403320 - 2404081 | 27209.9 |
| multifunctional cca addition/repair protein | EJI01_11630 | Not Available | Negative | 2404145 - 2405401 | 46296.9 |
| glutathione s-transferase | EJI01_11635 | Not Available | Negative | 2405443 - 2406087 | 23916.5 |
| glutathione s-transferase family protein | EJI01_11640 | Not Available | Negative | 2406091 - 2406774 | 25478.0 |
| mgtc/sapb family protein | EJI01_11645 | Not Available | Negative | 2406860 - 2407420 | 19410.0 |
| lytic transglycosylase domain-containing protein | EJI01_11650 | Not Available | Negative | 2407516 - 2409537 | 74390.6 |
| 5-formyltetrahydrofolate cyclo-ligase | EJI01_11655 | Not Available | Positive | 2409547 - 2410161 | 23057.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
