Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | EJI01_11405 | Not Available | Positive | 2344557 - 2345027 | 15965.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | EJI01_11410 | Not Available | Positive | 2345030 - 2346379 | 49512.7 |
| 50s ribosomal protein l11 methyltransferase | EJI01_11415 | Not Available | Positive | 2346396 - 2347280 | 31501.5 |
| duf3426 domain-containing protein | EJI01_11420 | Not Available | Positive | 2347323 - 2348621 | 45492.2 |
| carbohydrate kinase family protein | EJI01_11425 | Not Available | Positive | 2348665 - 2349567 | 32501.9 |
| histone | EJI01_11430 | Not Available | Negative | 2349634 - 2350113 | 15593.8 |
| ribonucleotide-diphosphate reductase subunit beta | EJI01_11435 | Not Available | Negative | 2350305 - 2351531 | 46700.6 |
| ribonucleoside-diphosphate reductase subunit alpha | EJI01_11440 | Not Available | Negative | 2351682 - 2354609 | 108155.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | EJI01_11445 | Not Available | Negative | 2354948 - 2355553 | 22476.2 |
| sigma-54-dependent fis family transcriptional regulator | EJI01_11450 | Not Available | Negative | 2355531 - 2357051 | 54103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
