Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | EJI01_11355 | Not Available | Negative | 2333639 - 2334502 | 31985.3 |
| rnb domain-containing ribonuclease | EJI01_11360 | Not Available | Negative | 2334499 - 2336559 | 74261.5 |
| esterase | EJI01_11365 | Not Available | Negative | 2336609 - 2337205 | 22484.8 |
| rod shape-determining protein roda | EJI01_11370 | Not Available | Positive | 2337254 - 2338408 | 41415.3 |
| metalloprotease tldd | EJI01_11375 | Not Available | Positive | 2338442 - 2339902 | 51388.0 |
| 3-deoxy-7-phosphoheptulonate synthase | EJI01_11380 | Not Available | Positive | 2340120 - 2341238 | 40530.5 |
| cupin domain-containing protein | EJI01_11385 | Not Available | Negative | 2341242 - 2341742 | 18648.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EJI01_11390 | Not Available | Negative | 2341747 - 2343240 | 52588.9 |
| hypothetical protein | EJI01_11395 | Not Available | Positive | 2343308 - 2343901 | 21978.3 |
| tlpa family protein disulfide reductase | EJI01_11400 | Not Available | Positive | 2343898 - 2344431 | 18895.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
