Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine--d-alanine ligase | EJI01_11305 | Not Available | Positive | 2323689 - 2324648 | 34544.4 |
| ftsq-type potra domain-containing protein | EJI01_11310 | Not Available | Positive | 2324741 - 2325523 | 28501.4 |
| cell division protein ftsa | EJI01_11315 | Not Available | Positive | 2325540 - 2326769 | 43627.1 |
| cell division protein ftsz | EJI01_11320 | Not Available | Positive | 2326929 - 2328137 | 41642.6 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | EJI01_11325 | Not Available | Positive | 2328340 - 2329263 | 33663.3 |
| crossover junction endodeoxyribonuclease ruvc | EJI01_11330 | Not Available | Negative | 2329501 - 2330049 | 19117.4 |
| phosphatidate cytidylyltransferase | EJI01_11335 | Not Available | Negative | 2330138 - 2331208 | 40054.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EJI01_11340 | Not Available | Negative | 2331205 - 2331966 | 27964.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EJI01_11345 | Not Available | Negative | 2332048 - 2332797 | 27803.6 |
| shikimate dehydrogenase | EJI01_11350 | Not Available | Negative | 2332794 - 2333636 | 29037.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
