Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EJI01_11255 | Not Available | Positive | 2310735 - 2311655 | 33505.0 |
| cell division protein ftsl | EJI01_11260 | Not Available | Positive | 2311745 - 2312092 | 12965.9 |
| penicillin-binding protein 2 | EJI01_11265 | Not Available | Positive | 2312089 - 2313837 | 63739.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EJI01_11270 | Not Available | Positive | 2313837 - 2315321 | 51920.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EJI01_11275 | Not Available | Positive | 2315318 - 2316766 | 50547.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EJI01_11280 | Not Available | Positive | 2316783 - 2317961 | 43348.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | EJI01_11285 | Not Available | Positive | 2317967 - 2319733 | 61038.0 |
| putative lipid ii flippase ftsw | EJI01_11290 | Not Available | Positive | 2319730 - 2321022 | 46605.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | EJI01_11295 | Not Available | Positive | 2321019 - 2322080 | 37322.6 |
| udp-n-acetylmuramate--l-alanine ligase | EJI01_11300 | Not Available | Positive | 2322235 - 2323692 | 51097.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
