Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 family protein | EJI01_11200 | Not Available | Positive | 2300365 - 2301054 | 25488.3 |
| ydcf family protein | EJI01_11205 | Not Available | Positive | 2301054 - 2301656 | 21708.4 |
| recombinase xerc | EJI01_11215 | Not Available | Positive | 2301768 - 2302757 | 36020.1 |
| methyltransferase domain-containing protein | EJI01_11220 | Not Available | Positive | 2302754 - 2303956 | 43446.9 |
| gtp-binding protein | EJI01_11225 | Not Available | Positive | 2304038 - 2305084 | 39300.8 |
| rna polymerase-binding protein dksa | EJI01_11230 | Not Available | Positive | 2305650 - 2306294 | 23643.2 |
| stas domain-containing protein | EJI01_11235 | Not Available | Positive | 2306420 - 2307997 | 56391.9 |
| atp-dependent protease subunit hslv | EJI01_11240 | Not Available | Positive | 2308148 - 2308693 | 19362.3 |
| atp-dependent protease atpase subunit hslu | EJI01_11245 | Not Available | Positive | 2308713 - 2310038 | 49062.8 |
| transcriptional regulator mraz | EJI01_11250 | Not Available | Positive | 2310298 - 2310726 | 15859.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
