Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | EJI01_11150 | Not Available | Positive | 2291369 - 2291806 | 15944.6 |
| lysr family transcriptional regulator | EJI01_11155 | Not Available | Negative | 2291803 - 2292696 | 32574.5 |
| glutathione s-transferase family protein | EJI01_11160 | Not Available | Positive | 2292796 - 2293497 | 25606.8 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | EJI01_11165 | Not Available | Positive | 2293678 - 2294550 | 30521.9 |
| hypothetical protein | EJI01_11170 | Not Available | Positive | 2294525 - 2295355 | 30116.8 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_11175 | Not Available | Positive | 2295405 - 2296415 | 34967.4 |
| lysr family transcriptional regulator | EJI01_11180 | Not Available | Negative | 2296403 - 2297299 | 31974.6 |
| nad(p)/fad-dependent oxidoreductase | EJI01_11185 | Not Available | Negative | 2297299 - 2298837 | 55799.0 |
| 2-hydroxychromene-2-carboxylate isomerase | EJI01_11190 | Not Available | Positive | 2298859 - 2299494 | 23658.1 |
| diaminopimelate epimerase | EJI01_11195 | Not Available | Positive | 2299502 - 2300368 | 30838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
