Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | EJI01_11100 | Not Available | Negative | 2280037 - 2281701 | 59730.1 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_11105 | Not Available | Positive | 2281816 - 2282823 | 35417.6 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | EJI01_11110 | Not Available | Positive | 2282967 - 2284214 | 45124.8 |
| alpha-ketoacid dehydrogenase subunit beta | EJI01_11115 | Not Available | Positive | 2284274 - 2285287 | 36954.1 |
| 2-oxo acid dehydrogenase subunit e2 | EJI01_11120 | Not Available | Positive | 2285288 - 2286544 | 43804.5 |
| nodulation protein nfed | EJI01_11125 | Not Available | Positive | 2286591 - 2287982 | 47576.2 |
| slipin family protein | EJI01_11130 | Not Available | Positive | 2287985 - 2288755 | 28534.3 |
| magnesium and cobalt transport protein cora | EJI01_11135 | Not Available | Positive | 2288841 - 2289815 | 36394.7 |
| hypothetical protein | EJI01_11140 | Not Available | Positive | 2289725 - 2290327 | 20902.8 |
| class i sam-dependent methyltransferase | EJI01_11145 | Not Available | Negative | 2290293 - 2291303 | 36243.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
