Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EJI01_11045 | Not Available | Negative | 2269315 - 2270268 | 34462.0 |
| abc transporter substrate-binding protein | EJI01_11050 | Not Available | Negative | 2270284 - 2271951 | 60566.8 |
| dihydroorotase | EJI01_11055 | Not Available | Positive | 2272042 - 2273082 | 38071.4 |
| nyn domain-containing protein | EJI01_11060 | Not Available | Positive | 2273079 - 2273828 | 26772.4 |
| duf3025 domain-containing protein | EJI01_11065 | Not Available | Positive | 2273849 - 2274601 | 26935.3 |
| protease htpx | EJI01_11070 | Not Available | Positive | 2274785 - 2275657 | 30547.8 |
| nad(p)/fad-dependent oxidoreductase | EJI01_11075 | Not Available | Negative | 2275688 - 2277325 | 58334.4 |
| cysteine synthase a | EJI01_11080 | Not Available | Negative | 2277395 - 2278315 | 32326.3 |
| hypothetical protein | EJI01_11090 | Not Available | Negative | 2278695 - 2279333 | 22840.6 |
| rna-binding protein | EJI01_11095 | Not Available | Negative | 2279330 - 2280040 | 25813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
