Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | EJI01_10995 | Not Available | Negative | 2260806 - 2261267 | 16210.5 |
| zn-dependent hydrolase | EJI01_11000 | Not Available | Positive | 2261509 - 2262780 | 44585.1 |
| ureidoglycolate hydrolase | EJI01_11005 | Not Available | Positive | 2262780 - 2263271 | 16671.0 |
| polyketide cyclase | EJI01_11010 | Not Available | Negative | 2263258 - 2263722 | 17489.4 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | EJI01_11015 | Not Available | Positive | 2263820 - 2264647 | 28866.2 |
| hypothetical protein | EJI01_11020 | Not Available | Negative | 2264689 - 2264898 | 7566.95 |
| amidase | EJI01_11025 | Not Available | Negative | 2265019 - 2266197 | 41233.2 |
| abc transporter atp-binding protein | EJI01_11030 | Not Available | Negative | 2266219 - 2267208 | 35234.2 |
| abc transporter atp-binding protein | EJI01_11035 | Not Available | Negative | 2267248 - 2268267 | 36517.0 |
| abc transporter permease | EJI01_11040 | Not Available | Negative | 2268272 - 2269171 | 31372.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
