Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | EJI01_10945 | Not Available | Negative | 2248409 - 2248969 | 20475.1 |
| fad-dependent oxidoreductase | EJI01_10950 | Not Available | Negative | 2249070 - 2250236 | 41694.6 |
| tetr/acrr family transcriptional regulator | EJI01_10955 | Not Available | Positive | 2250337 - 2250909 | 20144.5 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_10960 | Not Available | Negative | 2250919 - 2251914 | 34995.5 |
| acyl-coa synthetase | EJI01_10965 | Not Available | Negative | 2251947 - 2253872 | 67475.2 |
| pimeloyl-coa dehydrogenase small subunit | EJI01_10970 | Not Available | Negative | 2253869 - 2255011 | 40115.8 |
| pimeloyl-coa dehydrogenase large subunit | EJI01_10975 | Not Available | Negative | 2255127 - 2256335 | 44277.9 |
| acetyl-coa c-acyltransferase | EJI01_10980 | Not Available | Negative | 2256427 - 2257617 | 41868.4 |
| 3-hydroxyacyl-coa dehydrogenase | EJI01_10985 | Not Available | Negative | 2257629 - 2259758 | 75606.5 |
| lysr family transcriptional regulator | EJI01_10990 | Not Available | Positive | 2259870 - 2260790 | 34118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
