Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EJI01_10895 | Not Available | Negative | 2237747 - 2238169 | 15257.5 |
| abc transporter atp-binding protein/permease | EJI01_10900 | Not Available | Positive | 2238211 - 2240127 | 70289.7 |
| 2-hydroxyacid dehydrogenase | EJI01_10905 | Not Available | Positive | 2240159 - 2241097 | 32951.9 |
| lysr family transcriptional regulator | EJI01_10910 | Not Available | Positive | 2241141 - 2242121 | 35788.9 |
| transporter substrate-binding domain-containing protein | EJI01_10915 | Not Available | Positive | 2242481 - 2243380 | 32322.8 |
| amino acid abc transporter permease | EJI01_10920 | Not Available | Positive | 2243476 - 2244204 | 27046.5 |
| amino acid abc transporter permease | EJI01_10925 | Not Available | Positive | 2244365 - 2245054 | 25578.1 |
| amino acid abc transporter atp-binding protein | EJI01_10930 | Not Available | Positive | 2245078 - 2245815 | 27037.2 |
| dctp family trap transporter solute-binding subunit | EJI01_10935 | Not Available | Negative | 2245959 - 2246993 | 37295.2 |
| trap transporter large permease | EJI01_10940 | Not Available | Negative | 2247114 - 2248412 | 45602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
