Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese catalase family protein | EJI01_10790 | Not Available | Positive | 2218488 - 2219405 | 32507.2 |
| hypothetical protein | EJI01_10795 | Not Available | Positive | 2219434 - 2219778 | 11305.0 |
| response regulator | EJI01_10800 | Not Available | Negative | 2219780 - 2220190 | 14547.6 |
| zip family metal transporter | EJI01_10805 | Not Available | Negative | 2220201 - 2221109 | 30639.0 |
| hemerythrin domain-containing protein | EJI01_10810 | Not Available | Negative | 2221174 - 2221668 | 18504.9 |
| response regulator transcription factor | EJI01_10815 | Not Available | Positive | 2221889 - 2222518 | 23062.2 |
| 4-amino-4-deoxy-l-arabinose transferase | EJI01_10820 | Not Available | Positive | 2222624 - 2222998 | 12713.0 |
| ubia family prenyltransferase | EJI01_10825 | Not Available | Positive | 2223000 - 2224421 | 51436.4 |
| duf2029 domain-containing protein | EJI01_10830 | Not Available | Positive | 2224333 - 2225949 | 59728.0 |
| tetr/acrr family transcriptional regulator | EJI01_10835 | Not Available | Positive | 2226051 - 2226728 | 24380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
