Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_10690 | Not Available | Negative | 2197558 - 2198205 | 22816.3 |
| hypothetical protein | EJI01_10695 | Not Available | Negative | 2198205 - 2200010 | 64163.9 |
| duf3348 domain-containing protein | EJI01_10700 | Not Available | Negative | 2200007 - 2200666 | 23769.3 |
| hypothetical protein | EJI01_10705 | Not Available | Positive | 2200852 - 2201061 | 7433.83 |
| aminoglycoside phosphotransferase | EJI01_10710 | Not Available | Positive | 2201099 - 2201287 | 6456.61 |
| alpha/beta hydrolase | EJI01_10715 | Not Available | Positive | 2201344 - 2202096 | 26604.0 |
| circadian clock protein kaic | EJI01_10720 | Not Available | Positive | 2202213 - 2203715 | 54390.6 |
| hybrid sensor histidine kinase/response regulator | EJI01_10725 | Not Available | Positive | 2203784 - 2205250 | 52710.7 |
| hypothetical protein | EJI01_10730 | Not Available | Negative | 2205257 - 2206117 | 30422.6 |
| amidohydrolase | EJI01_10735 | Not Available | Negative | 2206130 - 2207785 | 58968.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
