Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine kinase | EJI01_01035 | Not Available | Positive | 212681 - 213166 | 17710.8 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EJI01_01040 | Not Available | Positive | 213178 - 213960 | 28175.3 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | EJI01_01045 | Not Available | Positive | 213967 - 215007 | 38282.7 |
| lysm peptidoglycan-binding domain-containing protein | EJI01_01050 | Not Available | Positive | 215048 - 225202 | 359749.0 |
| arac family transcriptional regulator | EJI01_01055 | Not Available | Negative | 225225 - 226127 | 33352.7 |
| abc transporter substrate-binding protein | EJI01_01060 | Not Available | Positive | 226354 - 227931 | 57237.4 |
| peptidase m14 | EJI01_01065 | Not Available | Positive | 227943 - 228953 | 36320.9 |
| abc transporter permease | EJI01_01070 | Not Available | Positive | 228973 - 229950 | 34944.2 |
| abc transporter permease | EJI01_01075 | Not Available | Positive | 229990 - 230955 | 33817.1 |
| abc transporter atp-binding protein | EJI01_01080 | Not Available | Positive | 230961 - 231944 | 34695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
