Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | EJI01_10635 | Not Available | Positive | 2185706 - 2188243 | 93841.8 |
| hypothetical protein | EJI01_10640 | Not Available | Positive | 2188282 - 2188662 | 13000.2 |
| glsb/yeaq/ymge family stress response membrane protein | EJI01_10645 | Not Available | Positive | 2188687 - 2188956 | 9243.93 |
| adenylate/guanylate cyclase domain-containing protein | EJI01_10650 | Not Available | Negative | 2188907 - 2189458 | 19409.1 |
| phospholipase d family protein | EJI01_10655 | Not Available | Positive | 2189464 - 2191314 | 67574.5 |
| cyclic nucleotide-binding domain-containing protein | EJI01_10660 | Not Available | Negative | 2191351 - 2192988 | 59885.3 |
| hypothetical protein | EJI01_10670 | Not Available | Negative | 2193472 - 2194866 | 51395.1 |
| hamp domain-containing histidine kinase | EJI01_10675 | Not Available | Negative | 2195131 - 2196261 | 40278.2 |
| response regulator transcription factor | EJI01_10680 | Not Available | Negative | 2196400 - 2196780 | 13846.4 |
| duf2894 domain-containing protein | EJI01_10685 | Not Available | Negative | 2196936 - 2197583 | 23385.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
