Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoid occlusion factor slma | EJI01_10535 | Not Available | Positive | 2169837 - 2170484 | 23589.1 |
| catalase | EJI01_10540 | Not Available | Positive | 2170596 - 2172116 | 57093.5 |
| bon domain-containing protein | EJI01_10545 | Not Available | Negative | 2172312 - 2172845 | 18301.5 |
| hypothetical protein | EJI01_10550 | Not Available | Negative | 2172842 - 2173087 | 8385.5 |
| hypothetical protein | EJI01_10555 | Not Available | Negative | 2173156 - 2173872 | 24522.4 |
| lyse family translocator | EJI01_10560 | Not Available | Positive | 2174160 - 2174792 | 21999.3 |
| l-idonate 5-dehydrogenase | EJI01_10565 | Not Available | Negative | 2174793 - 2175827 | 36561.2 |
| glucose 1-dehydrogenase | EJI01_10570 | Not Available | Negative | 2175841 - 2176680 | 29632.4 |
| duf1090 family protein | EJI01_10575 | Not Available | Positive | 2176749 - 2177081 | 12307.0 |
| mbl fold metallo-hydrolase | EJI01_10580 | Not Available | Negative | 2177110 - 2177841 | 26290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
