Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | EJI01_10435 | Not Available | Positive | 2140341 - 2140733 | 14081.7 |
| glycosyltransferase family 2 protein | EJI01_10440 | Not Available | Positive | 2140905 - 2141351 | 16730.9 |
| hypothetical protein | EJI01_10445 | Not Available | Positive | 2141366 - 2141641 | 10036.0 |
| hypothetical protein | EJI01_10450 | Not Available | Positive | 2141638 - 2143233 | 57085.9 |
| gdp-mannose 4,6-dehydratase | EJI01_10455 | Not Available | Negative | 2143386 - 2144423 | 38806.6 |
| fkbm family methyltransferase | EJI01_10460 | Not Available | Positive | 2144747 - 2147905 | 117931.0 |
| glycosyltransferase | EJI01_10465 | Not Available | Positive | 2147981 - 2150392 | 89004.8 |
| glycosyltransferase | EJI01_10470 | Not Available | Positive | 2150397 - 2151557 | 43785.2 |
| gdp-l-fucose synthase | EJI01_10475 | Not Available | Positive | 2151613 - 2152569 | 35298.4 |
| glycosyltransferase | EJI01_10480 | Not Available | Positive | 2152562 - 2154706 | 80114.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
