Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_10385 | Not Available | Positive | 2130816 - 2132450 | 59366.5 |
| dtdp-glucose 4,6-dehydratase | EJI01_10390 | Not Available | Positive | 2132523 - 2133584 | 39751.8 |
| dtdp-4-dehydrorhamnose reductase | EJI01_10395 | Not Available | Positive | 2133581 - 2134471 | 32101.3 |
| glucose-1-phosphate thymidylyltransferase | EJI01_10400 | Not Available | Positive | 2134494 - 2135381 | 32256.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EJI01_10405 | Not Available | Positive | 2135378 - 2135926 | 20471.1 |
| cdp-glucose 4,6-dehydratase | EJI01_10410 | Not Available | Positive | 2135923 - 2137008 | 39912.6 |
| nad-dependent epimerase/dehydratase family protein | EJI01_10415 | Not Available | Positive | 2137005 - 2137835 | 29916.2 |
| glycosyltransferase | EJI01_10420 | Not Available | Positive | 2137832 - 2138815 | 36979.3 |
| glucose-1-phosphate cytidylyltransferase | EJI01_10425 | Not Available | Positive | 2138832 - 2139605 | 29005.4 |
| class i sam-dependent methyltransferase | EJI01_10430 | Not Available | Positive | 2139484 - 2140344 | 30762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
