Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | EJI01_10280 | Not Available | Negative | 2112314 - 2113429 | 40667.7 |
| rhodanese-like domain-containing protein | EJI01_10285 | Not Available | Positive | 2113607 - 2114071 | 16294.2 |
| arginase family protein | EJI01_10290 | Not Available | Negative | 2114068 - 2114991 | 32681.9 |
| peptidoglycan-binding protein lysm | EJI01_10295 | Not Available | Negative | 2115027 - 2115491 | 16150.1 |
| type iii pantothenate kinase | EJI01_10300 | Not Available | Positive | 2115612 - 2116385 | 27232.9 |
| duf2817 domain-containing protein | EJI01_10310 | Not Available | Negative | 2116512 - 2117606 | 39858.7 |
| amidohydrolase | EJI01_10315 | Not Available | Negative | 2117603 - 2118817 | 43411.1 |
| acetylornithine deacetylase | EJI01_10320 | Not Available | Positive | 2118905 - 2120113 | 43797.9 |
| duf445 domain-containing protein | EJI01_10325 | Not Available | Positive | 2120110 - 2121333 | 44440.0 |
| helix-turn-helix domain-containing protein | EJI01_10330 | Not Available | Negative | 2121676 - 2121960 | 10600.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
