Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escv/yscv/hrcv family type iii secretion system export apparatus protein | EJI01_00985 | Not Available | Positive | 203149 - 205221 | 74898.9 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EJI01_00990 | Not Available | Positive | 205256 - 205522 | 9557.03 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EJI01_00995 | Not Available | Positive | 205519 - 207279 | 62471.0 |
| forkhead-associated protein | EJI01_01000 | Not Available | Positive | 207284 - 208456 | 41846.0 |
| hypothetical protein | EJI01_01005 | Not Available | Positive | 208588 - 208791 | 6599.6 |
| hypothetical protein | EJI01_01010 | Not Available | Positive | 208852 - 209265 | 14261.0 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EJI01_01015 | Not Available | Positive | 209262 - 210029 | 27747.7 |
| type iii secretion system protein | EJI01_01020 | Not Available | Positive | 210026 - 210700 | 25182.8 |
| hrpe/yscl family type iii secretion apparatus protein | EJI01_01025 | Not Available | Positive | 210682 - 211320 | 23073.8 |
| flii/yscn family atpase | EJI01_01030 | Not Available | Positive | 211353 - 212684 | 46806.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
