Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EJI01_10080 | Not Available | Negative | 2070464 - 2071384 | 33827.5 |
| pyridoxal-phosphate dependent enzyme | EJI01_10085 | Not Available | Positive | 2071488 - 2072627 | 39863.5 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_10090 | Not Available | Positive | 2072650 - 2073624 | 33604.9 |
| hemerythrin domain-containing protein | EJI01_10095 | Not Available | Negative | 2073639 - 2074166 | 19581.7 |
| duf3297 family protein | EJI01_10100 | Not Available | Positive | 2074304 - 2074552 | 9292.39 |
| hypothetical protein | EJI01_10105 | Not Available | Positive | 2074690 - 2074944 | 9022.38 |
| glyoxalase | EJI01_10110 | Not Available | Negative | 2074956 - 2075333 | 13882.5 |
| hypothetical protein | EJI01_10115 | Not Available | Negative | 2075350 - 2076816 | 53066.7 |
| srpbcc family protein | EJI01_10120 | Not Available | Negative | 2076983 - 2077423 | 16384.2 |
| flotillin family protein | EJI01_10125 | Not Available | Negative | 2077427 - 2079121 | 61650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
