Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp family trap transporter solute-binding subunit | EJI01_09875 | Not Available | Negative | 2029581 - 2030552 | 35229.6 |
| hypothetical protein | EJI01_09885 | Not Available | Positive | 2031180 - 2031395 | 8041.5 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | EJI01_09890 | Not Available | Negative | 2031352 - 2033046 | 61876.8 |
| sdr family oxidoreductase | EJI01_09895 | Not Available | Positive | 2033173 - 2033955 | 27410.1 |
| dmt family transporter | EJI01_09900 | Not Available | Positive | 2033967 - 2034854 | 31083.7 |
| acyl-coa thioesterase | EJI01_09905 | Not Available | Positive | 2034851 - 2035267 | 15778.0 |
| chase2 domain-containing protein | EJI01_09910 | Not Available | Negative | 2035268 - 2037808 | 91206.2 |
| lysm peptidoglycan-binding domain-containing protein | EJI01_09915 | Not Available | Negative | 2037606 - 2039345 | 61496.9 |
| response regulator transcription factor | EJI01_09920 | Not Available | Negative | 2039326 - 2040042 | 27076.6 |
| hypothetical protein | EJI01_09925 | Not Available | Positive | 2040450 - 2040665 | 7584.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
