Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycii family protein | EJI01_09825 | Not Available | Negative | 2018604 - 2019032 | 16337.6 |
| nad(p)h-hydrate dehydratase | EJI01_09830 | Not Available | Negative | 2019165 - 2020046 | 30043.4 |
| histidine phosphatase family protein | EJI01_09835 | Not Available | Negative | 2020063 - 2020830 | 28777.6 |
| glycine dehydrogenase (aminomethyl-transferring) | EJI01_09840 | Not Available | Negative | 2020909 - 2023803 | 103537.0 |
| glycine cleavage system protein gcvh | EJI01_09845 | Not Available | Negative | 2023817 - 2024191 | 13263.4 |
| glycine cleavage system aminomethyltransferase gcvt | EJI01_09850 | Not Available | Negative | 2024436 - 2025620 | 41483.5 |
| hypothetical protein | EJI01_09855 | Not Available | Negative | 2025903 - 2026811 | 34625.7 |
| hypothetical protein | EJI01_09860 | Not Available | Negative | 2026944 - 2027474 | 19717.8 |
| trap transporter large permease | EJI01_09865 | Not Available | Negative | 2027559 - 2028836 | 44375.5 |
| trap transporter small permease | EJI01_09870 | Not Available | Negative | 2029000 - 2029494 | 18400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
