Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybfb/yjij family mfs transporter | EJI01_09775 | Not Available | Positive | 2009430 - 2010581 | 38439.0 |
| carboxymuconolactone decarboxylase family protein | EJI01_09780 | Not Available | Positive | 2010623 - 2011216 | 21308.8 |
| amino acid abc transporter substrate-binding protein | EJI01_09785 | Not Available | Positive | 2011331 - 2012224 | 31983.6 |
| lysr family transcriptional regulator | EJI01_09790 | Not Available | Negative | 2012228 - 2013133 | 33641.3 |
| aminotransferase class v-fold plp-dependent enzyme | EJI01_09795 | Not Available | Positive | 2013238 - 2014539 | 48007.7 |
| duf3014 domain-containing protein | EJI01_09800 | Not Available | Positive | 2014680 - 2015564 | 32211.3 |
| rna polymerase sigma factor | EJI01_09805 | Not Available | Negative | 2015587 - 2016930 | 48632.7 |
| ycii family protein | EJI01_09810 | Not Available | Negative | 2016884 - 2017291 | 14912.1 |
| hypothetical protein | EJI01_09815 | Not Available | Negative | 2017406 - 2018101 | 24391.8 |
| ycii family protein | EJI01_09820 | Not Available | Negative | 2018152 - 2018592 | 16177.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
