Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EJI01_09725 | Not Available | Positive | 2000551 - 2001426 | 30605.2 |
| branched-chain amino acid abc transporter permease | EJI01_09730 | Not Available | Positive | 2001423 - 2002418 | 35186.8 |
| abc transporter atp-binding protein | EJI01_09735 | Not Available | Positive | 2002415 - 2003200 | 28188.6 |
| abc transporter atp-binding protein | EJI01_09740 | Not Available | Positive | 2003203 - 2003946 | 26741.1 |
| shikimate dehydrogenase | EJI01_09745 | Not Available | Positive | 2003966 - 2004799 | 29067.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | EJI01_09750 | Not Available | Positive | 2004812 - 2006023 | 42374.1 |
| carboxymuconolactone decarboxylase | EJI01_09755 | Not Available | Positive | 2006020 - 2006442 | 15742.1 |
| alpha/beta fold hydrolase | EJI01_09760 | Not Available | Positive | 2006439 - 2007203 | 26928.4 |
| dsba family oxidoreductase | EJI01_09765 | Not Available | Positive | 2007219 - 2007893 | 24679.1 |
| lysr family transcriptional regulator | EJI01_09770 | Not Available | Negative | 2008500 - 2009363 | 30967.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
