Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | EJI01_09675 | Not Available | Negative | 1988770 - 1989696 | 32662.0 |
| abc transporter | EJI01_09680 | Not Available | Negative | 1989719 - 1990657 | 32884.6 |
| ribose abc transporter permease | EJI01_09685 | Not Available | Negative | 1990795 - 1991808 | 34726.6 |
| sugar abc transporter atp-binding protein | EJI01_09690 | Not Available | Negative | 1991841 - 1993388 | 55028.0 |
| rok family protein | EJI01_09695 | Not Available | Negative | 1993381 - 1994625 | 44946.1 |
| mfs transporter | EJI01_09700 | Not Available | Positive | 1994955 - 1996364 | 50723.4 |
| 4-hydroxyphenylpyruvate dioxygenase | EJI01_09705 | Not Available | Negative | 1996622 - 1997407 | 28952.1 |
| shikimate dehydrogenase | EJI01_09710 | Not Available | Positive | 1997569 - 1998492 | 32680.3 |
| sugar phosphate isomerase/epimerase | EJI01_09715 | Not Available | Positive | 1998500 - 1999381 | 33039.3 |
| amino acid abc transporter substrate-binding protein | EJI01_09720 | Not Available | Positive | 1999378 - 2000544 | 40774.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
