Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | EJI01_00935 | Not Available | Positive | 195064 - 196002 | 34201.2 |
| sdr family oxidoreductase | EJI01_00940 | Not Available | Positive | 196081 - 196986 | 31992.6 |
| duf427 domain-containing protein | EJI01_00945 | Not Available | Negative | 196996 - 197379 | 14006.6 |
| duf1428 domain-containing protein | EJI01_00950 | Not Available | Positive | 197708 - 198067 | 13697.4 |
| lysr family transcriptional regulator | EJI01_00955 | Not Available | Negative | 198045 - 198989 | 33714.8 |
| nad(p)h dehydrogenase | EJI01_00960 | Not Available | Positive | 199078 - 199776 | 25599.4 |
| rida family protein | EJI01_00965 | Not Available | Positive | 199773 - 200180 | 14206.2 |
| glyoxalase | EJI01_00970 | Not Available | Positive | 200612 - 201055 | 16319.6 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EJI01_00975 | Not Available | Negative | 201086 - 201745 | 23946.2 |
| yscq/hrcq family type iii secretion apparatus protein | EJI01_00980 | Not Available | Negative | 201771 - 202853 | 38975.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
