Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gbsr/marr family transcriptional regulator | EJI01_09620 | Not Available | Negative | 1980336 - 1980965 | 23908.8 |
| transcriptional regulator | EJI01_09625 | Not Available | Positive | 1981128 - 1981577 | 16550.7 |
| srpbcc domain-containing protein | EJI01_09630 | Not Available | Positive | 1981466 - 1981933 | 17524.7 |
| rna polymerase sigma factor | EJI01_09635 | Not Available | Positive | 1981933 - 1983195 | 46004.1 |
| ycii family protein | EJI01_09640 | Not Available | Positive | 1983282 - 1983644 | 13268.1 |
| ycii family protein | EJI01_09645 | Not Available | Positive | 1983641 - 1984000 | 12880.3 |
| mfs transporter | EJI01_09650 | Not Available | Positive | 1983997 - 1985559 | 53286.3 |
| chorismate synthase | EJI01_09655 | Not Available | Positive | 1985654 - 1986781 | 39871.2 |
| mfs transporter | EJI01_09660 | Not Available | Positive | 1986781 - 1987962 | 42307.3 |
| putative toxin-antitoxin system toxin component, pin family | EJI01_09670 | Not Available | Positive | 1988341 - 1988763 | 15162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
