Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | EJI01_09520 | Not Available | Positive | 1958393 - 1959205 | 30757.0 |
| hypothetical protein | EJI01_09525 | Not Available | Positive | 1959257 - 1959565 | 11640.6 |
| carbohydrate abc transporter substrate-binding protein | EJI01_09530 | Not Available | Positive | 1959809 - 1961539 | 63976.9 |
| histidine phosphatase family protein | EJI01_09535 | Not Available | Positive | 1961631 - 1962185 | 19964.8 |
| n-methyl-d-aspartate receptor nmdar2c subunit | EJI01_09540 | Not Available | Negative | 1962186 - 1962803 | 23096.2 |
| lytic murein transglycosylase b | EJI01_09545 | Not Available | Negative | 1962806 - 1963855 | 38393.1 |
| duf3488 domain-containing protein | EJI01_09550 | Not Available | Negative | 1963909 - 1965906 | 73313.2 |
| hypothetical protein | EJI01_09555 | Not Available | Negative | 1965914 - 1966171 | 9028.59 |
| duf58 domain-containing protein | EJI01_09560 | Not Available | Negative | 1966657 - 1967625 | 35393.1 |
| moxr family atpase | EJI01_09565 | Not Available | Negative | 1967628 - 1968548 | 32798.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
