Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EJI01_09315 | Not Available | Positive | 1908675 - 1909139 | 16769.2 |
| dutp diphosphatase | EJI01_09320 | Not Available | Positive | 1909140 - 1909586 | 15910.2 |
| glycine zipper 2tm domain-containing protein | EJI01_09325 | Not Available | Positive | 1909752 - 1910243 | 16707.8 |
| peptidylprolyl isomerase | EJI01_09330 | Not Available | Negative | 1910295 - 1910819 | 18696.2 |
| cupin domain-containing protein | EJI01_09335 | Not Available | Positive | 1910834 - 1911973 | 41981.5 |
| hypothetical protein | EJI01_09340 | Not Available | Positive | 1911963 - 1912469 | 19017.4 |
| hypothetical protein | EJI01_09345 | Not Available | Positive | 1912563 - 1912835 | 8597.13 |
| mbl fold metallo-hydrolase | EJI01_09350 | Not Available | Negative | 1912885 - 1913661 | 27478.8 |
| outer membrane protein assembly factor bamc | EJI01_09360 | Not Available | Negative | 1913786 - 1914871 | 39751.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EJI01_09365 | Not Available | Negative | 1914986 - 1915876 | 31864.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
