Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EJI01_09215 | Not Available | Negative | 1891564 - 1892064 | 17990.2 |
| trna epoxyqueuosine(34) reductase queg | EJI01_09220 | Not Available | Positive | 1892050 - 1893120 | 39581.5 |
| hypothetical protein | EJI01_09225 | Not Available | Negative | 1893107 - 1893529 | 14774.7 |
| aec family transporter | EJI01_09230 | Not Available | Negative | 1893571 - 1894476 | 31658.4 |
| tripartite tricarboxylate transporter substrate binding protein buge | EJI01_09235 | Not Available | Positive | 1894583 - 1895557 | 34223.5 |
| site-specific tyrosine recombinase xerd | EJI01_09240 | Not Available | Positive | 1895624 - 1896526 | 33593.7 |
| duf72 domain-containing protein | EJI01_09245 | Not Available | Positive | 1896528 - 1897268 | 27369.7 |
| tripartite tricarboxylate transporter substrate binding protein | EJI01_09250 | Not Available | Positive | 1897291 - 1898262 | 33112.9 |
| maoc family dehydratase | EJI01_09255 | Not Available | Positive | 1898345 - 1898797 | 16385.6 |
| ferritin-like domain-containing protein | EJI01_09260 | Not Available | Negative | 1898794 - 1899597 | 30073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
