Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline hydroxylase | EJI01_09165 | Not Available | Negative | 1881427 - 1882302 | 32821.1 |
| gntr family transcriptional regulator | EJI01_09170 | Not Available | Negative | 1882299 - 1882994 | 25082.0 |
| abc transporter atp-binding protein | EJI01_09175 | Not Available | Negative | 1883078 - 1883725 | 22724.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EJI01_09180 | Not Available | Negative | 1883722 - 1884651 | 33314.3 |
| bcr/cfla family efflux mfs transporter | EJI01_09185 | Not Available | Negative | 1884641 - 1885831 | 41234.8 |
| alpha/beta fold hydrolase | EJI01_09190 | Not Available | Negative | 1885934 - 1886881 | 33916.3 |
| dna mismatch repair endonuclease mutl | EJI01_09195 | Not Available | Negative | 1887044 - 1888882 | 66088.7 |
| deda family protein | EJI01_09200 | Not Available | Positive | 1888943 - 1889593 | 24144.0 |
| glycine zipper 2tm domain-containing protein | EJI01_09205 | Not Available | Negative | 1889651 - 1889929 | 9242.83 |
| n-acetylmuramoyl-l-alanine amidase | EJI01_09210 | Not Available | Negative | 1890119 - 1891567 | 50967.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
