Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | EJI01_00880 | Not Available | Positive | 183623 - 185725 | 75653.9 |
| m20 family peptidase | EJI01_00885 | Not Available | Positive | 185746 - 187218 | 52582.5 |
| acetyl-coa c-acyltransferase | EJI01_00890 | Not Available | Positive | 187250 - 188425 | 40603.2 |
| acyl-coa dehydrogenase | EJI01_00895 | Not Available | Positive | 188473 - 190329 | 67119.0 |
| hypothetical protein | EJI01_00900 | Not Available | Positive | 190329 - 190523 | 6951.92 |
| dabb family protein | EJI01_00905 | Not Available | Positive | 190602 - 190883 | 10299.6 |
| glucose 1-dehydrogenase | EJI01_00915 | Not Available | Positive | 191002 - 191796 | 28006.7 |
| paai family thioesterase | EJI01_00920 | Not Available | Positive | 191789 - 192247 | 16744.1 |
| nadp-dependent oxidoreductase | EJI01_00925 | Not Available | Positive | 192258 - 193274 | 36146.8 |
| dna alkylation response protein | EJI01_00930 | Not Available | Positive | 193297 - 195036 | 62154.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
