Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbm family methyltransferase | EJI01_09105 | Not Available | Positive | 1857001 - 1857879 | 32890.7 |
| ftsx-like permease family protein | EJI01_09110 | Not Available | Negative | 1857863 - 1860394 | 87989.5 |
| hypothetical protein | EJI01_09120 | Not Available | Negative | 1860582 - 1860878 | 10852.0 |
| duf4347 domain-containing protein | EJI01_09125 | Not Available | Positive | 1861008 - 1871888 | 362786.0 |
| tolc family protein | EJI01_09130 | Not Available | Positive | 1871950 - 1873851 | 69353.0 |
| efflux rnd transporter periplasmic adaptor subunit | EJI01_09135 | Not Available | Positive | 1873668 - 1874636 | 33572.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | EJI01_09140 | Not Available | Positive | 1874656 - 1876008 | 48715.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | EJI01_09145 | Not Available | Positive | 1876002 - 1878095 | 77769.6 |
| amidase | EJI01_09155 | Not Available | Negative | 1878791 - 1880065 | 43663.6 |
| flagellar biosynthesis protein flga | EJI01_09160 | Not Available | Negative | 1880065 - 1881423 | 48650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
