Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. MHTC-1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
968631 bp
Thymine Count
969319 bp
Guanine Count
1978850 bp
Cytosine Count
1966842 bp
Genome Length
5892341 bp
Protein-coding Genes
5482 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid 1,2-hydratase | EJI01_09055 | Not Available | Negative | 1847659 - 1848702 | 38950.8 |
| plp-dependent cysteine synthase family protein | EJI01_09060 | Not Available | Negative | 1848705 - 1849775 | 38403.5 |
| cytochrome c biogenesis protein dipz | EJI01_09065 | Not Available | Negative | 1849803 - 1851590 | 63058.1 |
| hamp domain-containing protein | EJI01_09070 | Not Available | Negative | 1851615 - 1852931 | 47916.5 |
| organic hydroperoxide resistance protein | EJI01_09075 | Not Available | Negative | 1852955 - 1853371 | 14191.8 |
| hypothetical protein | EJI01_09080 | Not Available | Negative | 1853368 - 1853559 | 6941.36 |
| response regulator | EJI01_09085 | Not Available | Positive | 1853632 - 1854372 | 27906.9 |
| thioredoxin family protein | EJI01_09090 | Not Available | Negative | 1854514 - 1855074 | 20640.7 |
| duf2182 domain-containing protein | EJI01_09095 | Not Available | Negative | 1855407 - 1856198 | 28236.6 |
| duf1326 domain-containing protein | EJI01_09100 | Not Available | Positive | 1856350 - 1856964 | 21253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
